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    • Funded Project Summary for Fiscal Year: 2014


    Project TitleProject Information
    Drug Effect Discovery Through Data Mining and Integrative Chemical Biology Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01GM107145-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): TATONETTI, NICHOLAS P
    Institution: COLUMBIA UNIVERSITY HEALTH SCIENCES
    Protein Networks and Force Generation in Yeast Endocytosis Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01GM107667-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): CARLSSON, ANDERS E.
    Institution: WASHINGTON UNIVERSITY
    Novel MRI Imaging Tools and Software for Assessing Pediatric Crohn's Disease Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01DK100404-01
    Actv: R01
    IC: DK
    PI Name(Contact): FREIMAN, MOTI
    Institution: CHILDREN'S HOSPITAL CORPORATION
    Computational tools for the analysis of high-throughput immunoglobulin sequencing Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01AI104739-01A1
    Actv: R01
    IC: AI
    PI Name(Contact): KLEINSTEIN, STEVEN H.
    Institution: YALE UNIVERSITY
    Statistical Methods for Transcriptome Profiling Using RNA Sequencing Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01GM108600-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): LI, MINGYAO
    Institution: UNIVERSITY OF PENNSYLVANIA
    Computational Methods for Next-Generation Comparative Genomics Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01HG007352-01A1
    Actv: R01
    IC: HG
    PI Name(Contact): MA, JIAN
    Institution: UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN
    Quantitative Multiscale Imaging to Optimize Cancer Treatment Strategies Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01CA186193-01
    Actv: R01
    IC: CA
    PI Name(Contact): QUARANTA, VITO
    Institution: VANDERBILT UNIVERSITY
    New Integrative Pathway Analysis Methods to Predict Biomedical Outcomes Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01GM109031-01
    Actv: R01
    IC: GM
    PI Name(Contact): STUART, JOSHUA MICHAEL
    Institution: UNIVERSITY OF CALIFORNIA, SANTA CRUZ
    Computational methods for unraveling combinatorial gene regulation Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01GM108716-01
    Actv: R01
    IC: GM
    PI Name(Contact): TAN, KAI
    Institution: UNIVERSITY OF IOWA
    Algorithms to identify non-coding mutational burden and disease-relevant pathways Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01DK101478-01
    Actv: R01
    IC: DK
    PI Name(Contact): VOIGHT, BENJAMIN FRANKLIN
    Institution: UNIVERSITY OF PENNSYLVANIA
    The Development of Computational Methods for Fluctuation Xray Scattering Fiscal Year: 2014
    RFA/PA Number: PAR09-218
    Grant Number: 1R01GM109019-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): ZWART, PETRUS H.
    Institution: NIVERSITY OF CALIF-LAWRENC BERKELEY LAB
    Methods for Determining Transcription Factor-DNA Kinetics In Vivo Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21GM110380-01
    Actv: R21
    IC: GM
    PI Name(Contact): BEKIRANOV, STEFAN
    Institution: UNIVERSITY OF VIRGINIA
    Combinatorial RNA Structural Features That Control RNA-Protein Binding Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21HG007554-01
    Actv: R21
    IC: HG
    PI Name(Contact): CHUANG, JEFFREY HSU-MIN
    Institution: JACKSON LABORATORY
    Multidimensional Molecular Biomarkers of MultiOrgan Dysfunction after MCS Therapy Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21HL120040-01A1
    Actv: R21
    IC: HL
    PI Name(Contact): DENG, MARIO C.
    Institution: UNIVERSITY OF CALIFORNIA, LOS ANGELES
    Model Comparison in Structural Biology Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21GM110580-01
    Actv: R21
    IC: GM
    PI Name(Contact): FRASER, JAMES SOLOMON
    Institution: UNIVERSITY OF CALIFORNIA, SAN FRANCISCO
    Computational Metabolomics of Gut Microbiota Metabolites Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21GM106251-01A1
    Actv: R21
    IC: GM
    PI Name(Contact): LEE, KYONGBUM
    Institution: TUFTS UNIVERSITY MEDFORD
    Generating nuclear pore complex mimics with DNA origami Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21GM109466-01
    Actv: R21
    IC: GM
    PI Name(Contact): LIN, CHENXIANG
    Institution: YALE UNIVERSITY
    Computational methods for mechanistic understanding of inter-sample variability Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21HL122564-01
    Actv: R21
    IC: HL
    PI Name(Contact): SOBIE, ERIC A.
    Institution: ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
    Nonparametric Methods for Clinical Predictive Model in Pharmacogenomics Research Fiscal Year: 2014
    RFA/PA Number: PAR09-219
    Grant Number: 1R21GM101504-01A1
    Actv: R21
    IC: GM
    PI Name(Contact): XIE, JUN
    Institution: PURDUE UNIVERSITY WEST LAFAYETTE
    Improving red blood cell transfusion through systems biology Fiscal Year: 2014
    RFA/PA Number: PAR09-220
    Grant Number: 1R43HL123074-01
    Actv: R43
    IC: HL
    PI Name(Contact): BORDBAR, AARASH
    Institution: CHOMICS, INC.
    Accurate accessible cloud software for protein folding for molecular biologists Fiscal Year: 2014
    RFA/PA Number: PAR09-220
    Grant Number: 1R44GM110814-01
    Actv: R44
    IC: GM
    PI Name(Contact): DARNELL, STEVEN JOSEPH
    Institution: DNASTAR, INC.
    Reproducibility Assessment for Multivariate Assays Fiscal Year: 2014
    RFA/PA Number: PAR09-220
    Grant Number: 1R43GM109503-01
    Actv: R43
    IC: GM
    PI Name(Contact): FRALEY, CHRIS
    Institution: INSILICOS
    Myocardial blood flow quantitation with the novel F-18 Flurpiridaz PET imaging tr Fiscal Year: 2014
    RFA/PA Number: PAR09-220
    Grant Number: 1R43HL123069-01
    Actv: R43
    IC: HL
    PI Name(Contact): VAN TRAIN, KENNETH
    Institution: SYNTERMED, INC.
    Statistical Mechanics with Quantum Potentials: Application to Host-Gues Fiscal Year: 2014
    RFA/PA Number: PAR09-220
    Grant Number: 1R44GM109679-01
    Actv: R44
    IC: GM
    PI Name(Contact): WEBB, SIMON
    Institution: VERACHEM, LLC
    An Open Source Precision Medicine Platform for Cloud Operating Systems Fiscal Year: 2014
    RFA/PA Number: PAR09-220
    Grant Number: 1R43GM109737-01
    Actv: R43
    IC: GM
    PI Name(Contact): ZARANEK, ALEXANDER WAIT
    Institution: CUROVERSE, INC.
    De Novo Assembly Tools: Research with Unbiased Engines (DNA-TRUE) Fiscal Year: 2014
    RFA/PA Number: PAR11-028
    Grant Number: 1R01HG007182-01A1
    Actv: R01
    IC: HG
    PI Name(Contact): BIROL, INANC
    Institution: BRITISH COLUMBIA CANCER AGENCY
    Biospecimen management software for community-oriented sites Fiscal Year: 2014
    RFA/PA Number: PAR11-028
    Grant Number: 1R01CA188497-01
    Actv: R01
    IC: CA
    PI Name(Contact): HARRISON, JAMES H.
    Institution: UNIVERSITY OF VIRGINIA
    Powerful Simulation Tools for the Genomics Age Fiscal Year: 2014
    RFA/PA Number: PAR11-028
    Grant Number: 1R01HG007644-01
    Actv: R01
    IC: HG
    PI Name(Contact): HERNANDEZ, RYAN DANIEL
    Institution: UNIVERSITY OF CALIFORNIA, SAN FRANCISCO
    Software for Near Real-Time Post-Market Drug and Vaccine Safety Surveillance Fiscal Year: 2014
    RFA/PA Number: PAR11-028
    Grant Number: 1R01GM108999-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): KULLDORFF, MARTIN
    Institution: HARVARD PILGRIM HEALTH CARE, INC.
    Integrated Exchange & Storage of Current and Future-Generation Immunogenomic Data Fiscal Year: 2014
    RFA/PA Number: PAR11-028
    Grant Number: 1R01GM109030-01
    Actv: R01
    IC: GM
    PI Name(Contact): MACK, STEVEN JOHN
    Institution: CHILDREN'S HOSPITAL & RES CTR AT OAKLAND
    Critical Care Informatics Fiscal Year: 2014
    RFA/PA Number: PAR11-028
    Grant Number: 1R01EB017205-01A1
    Actv: R01
    IC: EB
    PI Name(Contact): MARK, ROGER GREENWOOD
    Institution: MASSACHUSETTS INSTITUTE OF TECHNOLOGY
    Multiscale modeling and empirical study of a mechanism limiting blood clot growth Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01HL116330-01A1
    Actv: U01
    IC: HL
    PI Name(Contact): ALBER, MARK
    Institution: UNIVERSITY OF NOTRE DAME
    Predictive Multiscale Modeling of Microbial Consortia Biofilms Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01EB019416-01
    Actv: U01
    IC: EB
    PI Name(Contact): CARLSON, ROSS P.
    Institution: MONTANA STATE UNIVERSITY - BOZEMAN
    Development of a Multiscale Mechanistic Simulation of Acetaminophen Induced Liver Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01GM111243-01
    Actv: U01
    IC: GM
    PI Name(Contact): GLAZIER, JAMES ALEXANDER
    Institution: INDIANA UNIVERSITY BLOOMINGTON
    Multi-Scale Laws of Myocardial Growth and Remodeling Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01HL119578-01A1
    Actv: U01
    IC: HL
    PI Name(Contact): GUCCIONE, JULIUS MATTEO
    Institution: UNIVERSITY OF CALIFORNIA, SAN FRANCISCO
    Multiscale Modeling of Wound Healing Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01EB018816-01
    Actv: U01
    IC: EB
    PI Name(Contact): HAUGH, JASON M.
    Institution: NORTH CAROLINA STATE UNIVERSITY RALEIGH
    Multiscale spatiotemporal modeling of cardiac mitochondria Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01HL116321-01A1
    Actv: U01
    IC: HL
    PI Name(Contact): LEDERER, WILLIAM JONATHAN
    Institution: UNIVERSITY OF MARYLAND BALTIMORE
    Microconnectomics of neocortex: a multiscale computer model Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01EB017695-01A1
    Actv: U01
    IC: EB
    PI Name(Contact): LYTTON, WILLIAM W.
    Institution: SUNY DOWNSTATE MEDICAL CENTER
    Transport Phenomena in the Lymphatic System Fiscal Year: 2014
    RFA/PA Number: PAR11-203
    Grant Number: 1U01HL123420-01
    Actv: U01
    IC: HL
    PI Name(Contact): ZAWIEJA, DAVID CARL
    Institution: TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR
    Safety Instruction and Competency Assessment for Laparoscopy Fiscal Year: 2014
    RFA/PA Number: PAR11-208
    Grant Number: 1R01EB018625-01A1
    Actv: R01
    IC: EB
    PI Name(Contact): PETERS, JORG
    Institution: UNIVERSITY OF FLORIDA
    Utilizing Imaged-based Features in Biomedical Literature Classification Fiscal Year: 2014
    RFA/PA Number: PAR11-208
    Grant Number: 1R56LM011354-01A1
    Actv: R56
    IC: LM
    PI Name(Contact): SHATKAY, HAGIT
    Institution: UNIVERSITY OF DELAWARE
    Informatics Tools for Pharmacogenomic Discovery using Practice-based Data Fiscal Year: 2014
    RFA/PA Number: PAR12-001
    Grant Number: 1R01GM103859-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): DENNY, JOSHUA CHARLES
    Institution: VANDERBILT UNIVERSITY
    Quantitative studies of influenza evolution Fiscal Year: 2014
    RFA/PA Number: PAR12-001
    Grant Number: 1R01GM109018-01
    Actv: R01
    IC: GM
    PI Name(Contact): SHAPIRA, SAGI
    Institution: COLUMBIA UNIVERSITY HEALTH SCIENCES
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