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Funded Project Summary for Fiscal Year: 2009

FY	RFA/PA Number	Actv	IC	Grant Number	PI Name(Contact)	Institution	Project Title
2009	PAR05-057	R01	EB	5R01EB004873-03	BAJAJ, CHANDRAJIT L	UNIVERSITY OF TEXAS AUSTIN	Software Maintenance for Biomolecular Complexes
2009	PAR05-057	R01	EB	5R01EB007195-03	CLEARY, KEVIN ROBERT	GEORGETOWN UNIVERSITY	Continued Development for The Image-guided Surgical Toolkit Project (IGSTK)
2009	PAR05-057	R01	GM	5R01GM080223-06	CONKLIN, BRUCE R	J. DAVID GLADSTONE INSTITUTES	GenMAPP-CS, a dynamic resource pathway analysis
2009	PAR05-057	R01	RR	5R01RR022971-03	DELISI, CHARLES	BOSTON UNIVERSITY	Visant-Predictome: A System for Integration, Mining Visualization and Analysis
2009	PAR05-057	R01	RR	5R01RR022200-03	DEMELER, BORRIES	UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT	UltraScan Software Maintenance and Development
2009	PAR05-057	R01	HG	5R01HG004341-03	EILBECK, KAREN LOUISE	UNIVERSITY OF UTAH	Softward to facilitate adoption of the Sequence Ontology for genome management
2009	PAR05-057	R01	MH	5R01MH081909-03	D'ESPOSITO, MARK	UNIVERSITY OF CALIFORNIA BERKELEY	Continued Development and Maintenance of the Neuroimaging in Python Project
2009	PAR05-057	R01	GM	5R01GM081066-03	KUMAR, SUDHIR	ARIZONA STATE UNIVERSITY-TEMPE CAMPUS	Re-engineering the MEGA software package
2009	PAR05-057	R01	GM	5R01GM081080-03	DUBCHAK, INNA	UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB	Comparative genomics with the VISTA/LAGAN computational system
2009	PAR05-057	R01	CA	5R01CA126593-03	LEWELLEN, THOMAS K.	UNIVERSITY OF WASHINGTON	University of Washington Emission Tomography Simulation Resource
2009	PAR05-057	R01	GM	5R01GM080227-04	GIGLIO, MICHELLE GWINN	UNIVERSITY OF MARYLAND BALTIMORE.	Maintenance and Expansion of the TIGR Annotation Engine Service
2009	PAR05-057	R01	NS	5R01NS050568-03	MAGNOTTA, VINCENT A	UNIVERSITY OF IOWA	BRAINS Morphology and Image Analysis
2009	PAR05-057	R01	GM	5R01GM077138-03	GLAZIER, JAMES ALEXANDER	INDIANA UNIVERSITY BLOOMINGTON	Development and Improvement of Tissue Simulation Toolkit
2009	PAR05-057	R01	GM	5R01GM082949-03	MARTONE, MARYANN E	UNIVERSITY OF CALIFORNIA SAN DIEGO	Community Development of the Cell Centered Database
2009	PAR05-057	R01	GM	5R01GM080221-03	MATISE, TARA C.	RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK	The Rutgers Mapping Resources
2009	PAR05-057	R01	GM	5R01GM080232-03	MERRITT, ETHAN A	UNIVERSITY OF WASHINGTON	Software tools for analysis and visulaization of protein structure
2009	PAR05-057	R01	HG	5R01HG004483-03	HOLMES, IAN H	UNIVERSITY OF CALIFORNIA BERKELEY	Enhancement of the GBrowse Genome Annotation Browser
2009	PAR05-057	R01	GM	5R01GM080219-03	MENDES, PEDR	VIRGINIA POLYTECHNIC INST AND ST UNIV	COPASI: Biochemical Network Modeling and Simulation Software
2009	PAR05-057	R01	RR	5R01RR021967-03	IRIZARRY, RAFAEL ANGEL	JOHNS HOPKINS UNIVERSITY	Software for the Statistical Analysis of Microarray Probe Level Data
2009	PAR05-057	R01	GM	5R01GM078598-03	SUNYAEV, SHAMIL	BRIGHAM AND WOMEN'S HOSPITAL	New Methods and Enhanced Software for Predicting Functional SNPs
2009	PAR05-057	R01	GM	5R01GM081070-03	SAURO, HERBERT M.	UNIVERSITY OF WASHINGTON	Continued Development and Maintenance of the Systems Biology Workbench
2009	PAR05-057	R01	GM	5R01GM081083-03	SMIT, ARIAN FREDERICUS ANTHONIUS	INSTITUTE FOR SYSTEMS BIOLOGY	Further development of the FEAST software, and its use for novel gene predictions
2009	PAR05-057	R01	GM	5R01GM077071-03	SAUTER, NICHOLAS K	UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB	LABELIT: Automated Diffraction Analysis for X-ray Crystallography
2009	PAR05-057	R01	EB	5R01EB007511-03	STALZER, MARK ANTHONY	CALIFORNIA INSTITUTE OF TECHNOLOGY	An Open and Scalable Stochastic Simulation Library for Biology
2009	PAR06-411	R21	HG	1R21HG005107-01	ALLEN, ERIC ELLSWORTH	UNIVERSITY OF CALIFORNIA SAN DIEGO	Phylogenetic Binning of Metagenomic Sequence Data
2009	PAR06-411	R21	GM	1R21GM088838-01	BYSTROFF, CHRISTOPHER	RENSSELAER POLYTECHNIC INSTITUTE	Computational design of specific binding proteins using Leave-One-Out
2009	PAR06-411	R21	LM	1R21LM009936-01A1	CLERMONT, GILLES	UNIVERSITY OF PITTSBURGH AT PITTSBURGH	Quantitative, Model-based Medical Decision support by Bayesian Inference
2009	PAR06-411	R21	GM	1R21GM087617-01A1	DOEMLING, ALEXANDER SIEGFRIED	UNIVERSITY OF PITTSBURGH AT PITTSBURGH	Anchor: A PDB-Wide And Web-Based Discovery Resource Of Small Molecular Weight Pro
2009	PAR06-411	R56	AI	1R56AI076221-01A1	KLINKE, DAVID JOHN	WEST VIRGINIA UNIVERSITY	Dendritic Cell Heterogeneity in Toll-like receptor 4 Signaling: Concept Validatio
2009	PAR06-411	R21	HL	1R21HL093675-01	FOLCIK NIVAR, VIRGINIA ANN	OHIO STATE UNIVERSITY	Agent-Based Modeling to Reveal Mechanisms of Idiopathic Interstitial Lung Disease
2009	PAR06-411	R21	EB	1R21EB008804-01A2	FINOL, ENDER A	CARNEGIE-MELLON UNIVERSITY	A Fluid-Structure Interaction Method for Patient-Specific Cardiovascular Modeling
2009	PAR06-411	R21	AI	1R21AI080567-01A1	EISEN, LARS	COLORADO STATE UNIVERSITY-FORT COLLINS	Use of cell phones for field data capture in a Dengue Decision Support System
2009	PAR06-411	R21	LM	1R21LM009550-01A1	LOGAN, JUDITH R	OREGON HEALTH AND SCIENCE UNIVERSITY	Exploiting the User Interface for Data Integration in Effectiveness Research
2009	PAR06-411	R21	NS	1R21NS064354-01A1	GAO, YONG	MASSACHUSETTS GENERAL HOSPITAL	NeuroIE: a Tool for Mining the Neuroanatomic Volumetric Literature
2009	PAR06-411	R21	GM	1R21GM088518-01	MERRITT, ETHAN A	UNIVERSITY OF WASHINGTON	Prediction of Protein Crystallization and Diffraction Quality
2009	PAR06-411	R21	CA	1R21CA129671-01A1	HU, JIANHUA	UNIVERSITY OF TEXAS MD ANDERSON CAN CTR	Nonparametric Analysis of Reverse-Phase Protein Lysate Array Data
2009	PAR06-411	R21	HG	1R21HG005133-01	TAYLOR, JAMES PETER	EMORY UNIVERSITY	A Turnkey Solution for Next Generation Sequence Data Analysis
2009	PAR06-411	R21	DE	1R21DE018878-01A1	PAPAGERAKIS, PETROS	UNIVERSITY OF MICHIGAN AT ANN ARBOR	Developmental Dynamics of Enamel Formation
2009	PAR06-411	R21	GM	1R21GM085665-01A1	WANG, YUE	VIRGINIA POLYTECHNIC INST AND ST UNIV	Machine learning to identify predictive SNPs and complex interaction effects
2009	PAR06-411	R21	GM	1R21GM083950-01A1	TIAN, JINGDONG	DUKE UNIVERSITY	A Novel Computational Package for DNA Enzyme Design
2009	PAR06-411	R21	AI	1R21AI077532-01A1	WU, JIANZHONG	UNIVERSITY OF CALIFORNIA RIVERSIDE	10-Theory and Experiment for Genome Packaging in HBV Nucleocapsids
2009	PAR06-411	R21	HL	1R21HL094916-01A1	PAPAVASILIOU, GEORGIA	ILLINOIS INSTITUTE OF TECHNOLOGY	PEG Hydrogel Enabling Technologies for Guiding Endothelial Cell Function
2009	PAR06-411	R21	AI	1R21AI081164-01A1	SEGRE, ALBERTO MARIA	UNIVERSITY OF IOWA	Contact Network Epidemiology of Influenza and Other Nosocomial Infections
2009	PAR06-411	R21	GM	1R21GM088816-01	ROHDE, GUSTAVO KUNDE	SCARNEGIE-MELLON UNIVERSITY	Deformation-Based Computational Morphometry for Cell Biology Applications
2009	PAR06-411	R21	GM	1R21GM083827-01A1	YTREBERG, FREDERICK MARTIN	UNIVERSITY OF IDAHO	Determining the conformational stability of NMR ensemble structures
2009	PAR06-411	R21	AG	1R21AG033387-01A1	ZHU, HONGTU	UNIVERSITY OF NORTH CAROLINA CHAPEL HILL	Longitudinal Analysis of Biomedical Imaging Data
2009	PAR06-411	R21	GM	1R21GM088517-01	ZOU, XIAOQIN	UNIVERSITY OF MISSOURI-COLUMBIA	A new scoring framework for selecting structural models
2009	PAR07-160	R43	HL	1R43GM087839-01	BRENNAN, RICHARD JOHN	GENEGO, INC.	An integrated systems pharmacology platform for pharmacogenomic research
2009	PAR07-160	R43	AI	1R43AI084307-01	CRAIG, JOHANNA C	GATACA, LLC	Integrated Desktop Software for Management of Hepatitic C Data
2009	PAR07-160	R43	RR	1R43RR028017-01A2	GENG, JASON	XIGEN, LLC	Novel Static Screen Volumetric 3D Display for Medical Image Visualization
2009	PAR07-160	R43	AR	1R43AR057272-01	HONG, SEUNG-HYUN	CYBERCONNECT EZ, LLC	Developing Contractual Service Framework for Bone Histomorphometry
2009	PAR07-160	R43	RR	1R43RR025727-01	NELSON, DAVID M K	KCI LIFE SCIENCES	C-ME/MOSS 2007 - Tools for Contextual Scientific Collaboration and Training
2009	PAR07-160	R43	LM	1R43LM010245-01	TURNER, WES	KITWARE, INC.	Flexible information visualization and analysis platform for biomedical research
2009	PAR07-160	R43	GM	1R43GM083346-01A1	WROBLEWSKI, DARIUSZ	BIOFORMATIX, INC.	Computational framework for analysis of microarray gene expression data
2009	PAR07-160	R43	NS	1R43NS066548-01	SMITH, MICHAEL E	CORTECHS LABS, INC.	FiberQuant: A Tool for Rapid Quantitative Analysis of White Matter Fiber Tracts
2009	PAR07-160	R43	HG	1R43HG005297-01	SMITH, TODD M	GEOSPIZA, INC..	Software Systems for Detecting Rare Muations
2009	PAR07-161	R41	GM	1R41GM087013-01	DRAGHICI, SORIN	ADVAITA CORPORATION	A Novel Method for Signaling Pathway Analysis
2009	PAR07-161	R41	CA	1R41CA139639-01A1	MYATT, GLENN JOHN	MYATT AND JOHNSON, INC.	A New Web 2.0 Platform for Analyzing Genomics Data with Application to the Study
2009	PAR07-161	R41	EB	1R41EB008414-01A1	JASPER, PAUL J.	NUMERICA TECHNOLOGY, INC.	Numerical Tools for analyzing cell signalling circuits in normal and tumor cells
2009	PAR07-161	R41	CA	1R41CA132790-01A1	RHODES, COLIN EDWARD	VIRTUALSCOPICS, INC.	Electronic Image Trial Management System
2009	PAR07-235	R01	GM	5R01GM084881-02	BAITALUK, MICHAEL	UNIVERSITY OF CALIFORNIA SAN DIEGO	BiologicalNetworks: Integrated Environment for Systems Biology
2009	PAR07-235	R01	GM	5R01GM083871-02	BURNS, GULLY APC	UNIVERSITY OF SOUTHERN CALIFORNIA	BioScholar: a Biomedical Knowledge Engineering framework based on the published l
2009	PAR07-235	R01	RR	5R01RR023920-02	BROOKS, CHARLES L	UNIVERSITY OF MICHIGAN AT ANN ARBOR	CHARMM Modernization, Performance and Continued Development
2009	PAR07-235	R01	GM	5R01GM077122-02	LI, CHENG	DANA-FARBER CANCER INSTITUTE	dChip:Analysis and Visualization of Oligonucleotide Expression and SNP Arrays
2009	PAR07-235	R01	RR	5R01RR025030-02	LI, WEIZHONG	UNIVERSITY OF CALIFORNIA SAN DIEGO	CD-HIT: A Fast Program to Cluster and Compare Large Sets of Biological Sequences
2009	PAR07-235	R01	HG	5R01HG004701-02	MURPHY, SEAN	J. CRAIG VENTER INSTITUTE, INC.	Genome-wide prediction and analysis of coding variants
2009	PAR07-235	R01	GM	5R01GM081084-02	THOMAS, PAUL D.	SRI INTERNATIONAL	Development and Maintenance of PANTHER Software
2009	PAR07-235	R01	EB	5R01EB007187-02	VALE, RONALD D	UNIVERSITY OF CALIFORNIA SAN FRANCISCO	Open Source Microscopy Software
2009	PAR07-235	R01	CA	5R01CA134232-02	PAYNE, PHILIP RICHARD ORRIN	OHIO STATE UNIVERSITY	Re-engineering the CRC Integrated Information Management System
2009	PAR07-235	R01	GM	1R01GM084892-01	WEBB-ROBERTSON, BOBBIE-JO MARY	BATTELLE PACIFIC NORTHWEST LABORATORIES	Visual Analytics Software Environment for Proteomics Data Integration
2009	PAR07-235	R01	RR	5R01RR025040-02	STELLING, JOHN	BRIGHAM AND WOMEN'S HOSPITAL	Continued development of WHONET for surveillance of infections & drug resistance
2009	PAR07-249	R01	GM	1R01GM086238-01	BAHAR, IVET	UNIVERSITY OF PITTSBURGH AT PITTSBURGH	Structural Dynamics of Biomolecular Systems
2009	PAR07-249	R01	CA	5R01CA127979-03	CROWLEY, REBECCA S	UNIVERSITY OF PITTSBURGH AT PITTSBURGH	The ODIE Toolkit - Software for Information Extraction and Biomedical Ontology De
2009	PAR07-249	R01	HL	1R01HL091495-01A1	DUBCHAK, INNA	UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB	Comparative Genomics of Non-Coding Regions to Facilitate Translational Research
2009	PAR07-249	R01	MH	1R01MH084795-01	LAINHART, JANET ELIZABETH	UNIVERSITY OF UTAH	The Microstructural Basis of Abnormal Connectivity in Autism
2009	PAR07-249	R01	HL	1R01HL086400-01A1	GUCCIONE, JULIUS MATTEO	NORTHERN CALIFORNIA INSTITUTE RES & EDUC	Simulation of Coronary Artery Bypass Graft and Surgical Ventricular Restoration
2009	PAR07-249	R01	EB	1R01EB008171-01A1	MILLER, MICHAEL I	JOHNS HOPKINS UNIVERSITY	3D Shape Analysis for Computational Anatomy
2009	PAR07-249	R01	NS	5R01NS055383-02	HIGGINSON, JILL S	UNIVERSITY OF DELAWARE	Muscle Morphology, Strength and Compensatory Strategies Following Stroke
2009	PAR07-249	R01	GM	5R01GM083649-03	HUNTER, LAWRENCE E	UNIVERSITY OF COLORADO DENVER	Ontologies and Biomedical Language Processing
2009	PAR07-249	R01	HL	5R01HL086418-02	HUMPHREY, JAY D	TEXAS ENGINEERING EXPERIMENT STATION	Biomechanical Simulation of Evolving Aortic Aneurysms for Designing Intervention
2009	PAR07-249	R01	AR	5R01AR056201-03	THELEN, DARRYL G	UNIVERSITY OF WISCONSIN MADISON	Biocomputation of the Links Between Muscle Morphology, Coordination and Injury
2009	PAR07-249	R01	MH	5R01MH082795-02	POLDRACK, RUSSELL A	UNIVERSITY OF CALIFORNIA LOS ANGELES	The Cognitive Atlas: Developing an Interdisciplinary Knowledge Base Through Socia
2009	PAR07-249	R01	HG	1R01HG004836-01	RAMONI, MARCO F	BRIGHAM AND WOMEN'S HOSPITAL	Automated Integration of Biomedical Knowledge
2009	PAR07-249	R01	CA	1R01CA131718-01A1	YOSHIDA, HIROYUKI	MASSACHUSETTS GENERAL HOSPITAL	NA-MIC virtual colonoscopy
2009	PAR07-249	R01	CA	5R01CA124380-02	SANDER, CHRIS	SLOAN-KETTERING INSTITUTE FOR CANCER RES	Application of MAGNet Tools to Gene Regulatory Networks in Cancer
2009	PAR07-249	R01	EB	5R01EB006733-02	SHEN, DINGGANG	UNIVERSITY OF NORTH CAROLINA CHAPEL HILL	Development and Dissemination of Robust Brain MRI Measurement Tools
2009	PAR07-249	R01	HL	5R01HL087773-02	YOUNG, ALISTAIR ANDREW	UNIVERSITY OF AUCKLAND	The Cardiac Atlas Project: Establishment of a Cardiac MRI Database.
2009	PAR07-249	R01	HL	5R01HL087795-02	SHETH, AMIT P	WRIGHT STATE UNIVERSITY	Semantics and Services enabled Problem Solving Environment for Trypanosoma cruzi
2009	PAR07-344	R01	NS	2R01NS039600-10A1	ASCOLI, GIORGIO A	GEORGE MASON UNIVERSITY	Generation and Description of Neuronal Morphology and Connectivit
2009	PAR07-344	R01	HG	1R01HG004962-01	BAFNA, VINEET	UNIVERSITY OF CALIFORNIA SAN DIEGO	Algorithmic strategies for detecting structural variation in genomes
2009	PAR07-344	R56	AI	1R56AI079095-01	BAKER, TIMOTHY S	UNIVERSITY OF CALIFORNIA SAN DIEGO	Parallel Software for Fast, Automated Determination of Virus Structures
2009	PAR07-344	R01	EB	1R01EB008407-01A1	BASSINGTHWAIGHTE, JAMES B	UNIVERSITY OF WASHINGTON	Software Integration between JSim and Systems Biology Workbench
2009	PAR07-344	R01	GM	1R01GM088277-01	BRADLEY, PHILIP	FRED HUTCHINSON CANCER RESEARCH CENTER	Predicting Protein-DNA Interactions with Structural Models
2009	PAR07-344	R01	EB	1R01EB006170-01A2	CONSTANTINOU, CHRISTOS EURIPIDES	PALO ALTO INSTITUTE FOR RES & EDU, INC.	Visualization of Pelvic Floor Reflexes
2009	PAR07-344	R01	CA	1R01CA130814-01A2	D'SOUZA, WARREN D	UNIVERSITY OF MARYLAND BALTIMORE	High-Throughput Computing for a Multi-Plan Framework in Radiotherapy
2009	PAR07-344	R01	EB	1R01EB007530-01A1	KAUFMAN, ARIE E	STATE UNIVERSITY NEW YORK STONY BROOK	Conformal Geometry for Medical Imaging
2009	PAR07-344	R01	MH	1R01MH081905-01A1	CROOK, SHARON MARIE	ARIZONA STATE UNIVERSITY-TEMPE CAMPUS	NeuroML: Standards and Tools for Multiscale Model Specification and Exchange
2009	PAR07-344	R01	AI	1R01AI083115-01A1	LEE, HA YOUN	UNIVERSITY OF ROCHESTER	Simulator for Primary HIV Replication and Evolution
2009	PAR07-344	R01	NS	1R01NS065347-01A1	GEE, JAMES C	UNIVERSITY OF PENNSYLVANIA	Tract-Specific Analysis of Brain White Matter
2009	PAR07-344	R01	EB	2R01EB003150-27	FREED, JACK H	CORNELL UNIVERSITY ITHACA	Electron Spin Relaxation in Model Membranes
2009	PAR07-344	R01	EB	1R01EB009352-01A1	MARCUS, DANIEL SCOTT	WASHINGTON UNIVERSITY	THE XNAT IMAGING INFORMATICS PLATFORM
2009	PAR07-344	R01	GM	1R01GM083072-01A2	GRYK, MICHAEL R	UNIVERSITY OF CONNECTICUT SCH OF MED/DNT	CONNJUR: A Software Integration Platform for Biomolecular NMR Spectroscopy
2009	PAR07-344	R01	GM	1R01GM086533-01A1	GUDA, CHITTIBABU	STATE UNIVERSITY OF NEW YORK AT ALBANY	Cataloging the subcellular and suborganellar proteomes of sequenced genomes
2009	PAR07-344	R01	AI	1R01AI081062-01A1	HE, YONGQUN	UNIVERSITY OF MICHIGAN AT ANN ARBOR	Ontology-based Information Network to Support Vaccine Research
2009	PAR07-344	R01	AI	2R01AI059694-06	MOORE, JASON H.	DARTMOUTH COLLEGE	Bioinformatics Strategies: Biodefense Vaccine Research
2009	PAR07-344	R01	HG	1R01HG004708-01A1	MOROZOV, ALEXANDRE V	RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK	Biophysical Models for Prediction and Design of Eukaryotic Chromatin Structure an
2009	PAR07-344	R01	GM	1R01GM086587-01	MUSEN, MARK A	STANFORD UNIVERSITY	Collaborative Development of Biomedical Ontologies and Terminologies
2009	PAR07-344	R01	CA	1R01CA132750-01A1	POGUE, BRIAN WILLIAM	DARTMOUTH COLLEGE	NIRFAST
2009	PAR07-344	R01	HG	1R01HG004909-01	NEKRUTENKO, ANTON	PENNSYLVANIA STATE UNIVERSITY-UNIV PARK	An Efficient Lightweight Environment for Biomedical Computation
2009	PAR07-344	R01	EB	1R01EB009557-01	RHEE, JOHN S	MEDICAL COLLEGE OF WISCONSIN	Computer Modeling of Surgical Outcomes for Nasal Airway Obstruction
2009	PAR07-344	R01	GM	2R01GM051387-13	WYSOCKI, VICKI H	UNIVERSITY OF ARIZONA	Influence of Peptide Structure on Dissociation
2009	PAR07-344	R01	CA	1R01CA132744-01A1	SANDER, CHRIS	SLOAN-KETTERING INSTITUTE FOR CANCER RES	Functional consequences of cancer mutations
2009	PAR07-344	R01	GM	1R01GM087694-01	XING, POE E	CARNEGIE-MELLON UNIVERSITY	Genome-Transcription-Phenome-Wide Association: a new paradigm for association stu
2009	PAR07-344	R01	CA	1R01CA133474-01A2	XING, LEI	STANFORD UNIVERSITY	Computational Tools for Adaptive Radiation Therapy
2009	PAR07-344	R01	HL	1R01HL092347-01A1	SHANNON, WILLIAM D	WASHINGTON UNIVERSITY	NEW DATA ANALYSIS METHODS FOR ACTIGRAPHY IN SLEEP MEDICINE
2009	PAR07-344	R01	GM	1R01GM087735-01	ZHANG, XIANG	UNIVERSITY OF LOUISVILLE	Mass Informatics of Two Dimensinoal Gas Chromatography Time-of-flight Mass Spectr
2009	PAR07-344	R01	EB	2R01EB004640-04	SONKA, MILAN	UNIVERSITY OF IOWA	Graph-Based Medical Image Segmentation in 3D and 4D
2009	PAR07-3440	R01	AG	1R01AG030198-01A2	YASHIN, ANATOLIY I	DUKE UNIVERSITY	New Methods of Studying Aging, Health and Longevity: Combining Longitudinal Data
2009	PAR08-010	R01	GM	1R01GM086243-01	BASHFORD, DONALD E.	ST. JUDE CHILDREN'S RESEARCH HOSPITAL	Development and Maintenance of the MEAD Software Suite
2009	PAR08-010	R01	CA	1R01CA132672-01A1	CROWLEY, REBECCA S	UNIVERSITY OF PITTSBURGH AT PITTSBURGH	Continued Development and Evaluation of caTIES
2009	PAR08-010	R01	GM	1R01GM087218-01	GODZIK, ADAM	SANFORD-BURNHAM MEDICAL RESEARCH INSTIT	Development of a comprehensive system for distant homology analysis
2009	PAR08-010	R01	EB	1R01EB009048-01	HAMALAINEN, MATTI	MASSACHUSETTS GENERAL HOSPITAL	Tools for Large-Scale Platform-Independent MEG Data Analysis
2009	PAR08-010	R01	HG	1R01HG004834-01	MICKLEM, GOS	UNIVERSITY OF CAMBRIDGE	Extending InterMine to yeast rat and zebrafish model organism databases
2009	PAR08-010	R01	NS	1R01NS058299-01A2	MORI, SUSUMU	JOHNS HOPKINS UNIVERSITY	DtiStudio: Resource Software for Diffusion Tensor Imaging
2009	PAR08-010	R01	GM	1R01GM084891-01A1	QIN, FENG	STATE UNIVERSITY OF NEW YORK AT BUFFALO	Algorithms for Molecular Kinetics
2009	PAR08-010	R01	EB	1R01EB008381-01A1	ROHLFING, TORSTEN	SRI INTERNATIONAL	Continued Development and Maintenance of a Computational Morphometry Toolkit
2009	PAR08-010	R01	GM	1R01GM084884-01A1	WENG, ZHIPING	UNIV OF MASSACHUSETTS MED SCH WORCESTER	Continual Development of Protein Docking Algorithms
2009	PAR08-010	R01	EB	1R01EB008374-01A2	SHEN, DINGGANG	UNIVERSITY OF NORTH CAROLINA CHAPEL HILL	Continued Development of 4-dimensional Image Warping and Registration Software
2009	PAR08-023	R01	HL	1R01HL094317-01	BEARD, DANIEL A	MEDICAL COLLEGE OF WISCONSIN	Mechanisms of Metabolic Dysfunction in Heart Disease
2009	PAR08-023	R01	HL	1R01HL095508-01	BERCELI, SCOTT A	UNIVERSITY OF FLORIDA	Multiscale Network Modeling of Hemodynamically-Driven Vascular Adaptation
2009	PAR08-023	R01	EB	1R01EB009643-01	ERDEMIR, AHMET	CLEVELAND CLINIC LERNER COL/MED-CWRU	Predicting cell deformation from body level mechanical loads
2009	PAR08-023	R01	HL	1R01HL096544-01	MCCULLOCH, ANDREW D.	UNIVERSITY OF CALIFORNIA SAN DIEGO	Multi-Scale Modeling of the Failing Heart for Cardiac Rysynchronization Therapy
2009	PAR08-023	R01	HL	1R01HL094269-01A1	MOORE, JAMES E	TEXAS ENGINEERING EXPERIMENT STATION	Lymphatic Fluid Flow Modeling with Active Network Components
2009	PAR08-023	R01	HL	1R01HL094270-01A1	KARNIADAKIS, GEORGE	BROWN UNIVERSITY	Multiscale Modeling and Parallel Simulations of Blood Flow in Cerebral Malaria an
2009	PAR08-023	R01	CA	1R01CA138264-01	POPEL, ALEKSANDER S.	JOHNS HOPKINS UNIVERSITY	Predictive experiment-based multiscale models of angiogenesis in breast cancer
2009	PAR08-023	R01	CA	2R01CA119232-04	WILSON, BRIDGET S	UNIVERSITY OF NEW MEXICO	MSM Mapping and Modeling ErbB Receptor Membrane Topogra

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Funded Project Summary for Fiscal Year: 2009

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