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    • Funded Project Summary for Fiscal Year: 2006


    Project TitleProject Information
    A New Approach to Rapid Protein-Protein Docking Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM073087-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): BAJAJ, CHANDRAJIT L
    Institution: UNIVERSITY OF TEXAS AUSTIN
    Comparative Toxicogenomics Database (CTD) Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01ES014065-01A1
    Actv: R01
    IC: ES
    PI Name(Contact): BOYER, JAMES L
    Institution: MOUNT DESERT ISLAND BIOLOGICAL LAB
    Predicting Protein Structure with Guided Conformation Space Search Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM076706-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): BROCK, OLIVER
    Institution: UNIVERSITY OF MASSACHUSETTS AMHERST
    Enabling new discoveries in pharmacogenomics through a genomic date-driven nosolo Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM079719-01
    Actv: R01
    IC: GM
    PI Name(Contact): BUTTE, ATUL J
    Institution: STANFORD UNIVERSITY
    Searching Genomes for Non-Coding RNAs by Their Structure Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM072080-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): CAI, LIMING
    Institution: UNIVERSITY OF GEORGIA (UGA)
    Combinatorial Genomics in Cancer Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01CA116778-01A2
    Actv: R01
    IC: CA
    PI Name(Contact): COLE, STEVE W
    Institution: UNIVERSITY OF CALIFORNIA LOS ANGELES
    3-D Multi-Articular Models of the Carpus Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HD052127-01
    Actv: R01
    IC: HD
    PI Name(Contact): CRISCO, JOSEPH J
    Institution: RHODE ISLAND HOSPITAL (PROVIDENCE, RI)
    Genomewide discovery & analysis of alternative promoters Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG003362-01A2
    Actv: R01
    IC: HG
    PI Name(Contact): DAVULURI, RAMANA V
    Institution: OHIO STATE UNIVERSITY
    Physically Realistic Virtual Surgery Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01EB005807-01
    Actv: R01
    IC: EB
    PI Name(Contact): DE, SUVRANU
    Institution: RENSSELAER POLYTECHNIC INSTITUTE
    A Core Database of Interacting Proteins (DIP) Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM071909-01A2
    Actv: R01
    IC: GM
    PI Name(Contact): EISENBERG, DAVID S
    Institution: UNIVERSITY OF CALIFORNIA LOS ANGELES
    Virtual Tools for Cardiac Ventricular Remodeling Surgery Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HL077921-01A2
    Actv: R01
    IC: HL
    PI Name(Contact): GUCCIONE, JULIUS
    Institution: NORTHERN CALIFORNIA INSTITUTE RES & EDUC
    An Automated System for Breast Cancer Biomarker Analysis Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01CA114491-01A2
    Actv: R01
    IC: CA
    PI Name(Contact): HEINE, JOHN J
    Institution: H. LEE MOFFITT CANCER CTR & RESEARCH INS
    Evolutionary Modeling/Prediction of ncRNA Genes in Flies Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM076705-01
    Actv: R01
    IC: GM
    PI Name(Contact): HOLMES, IAN H
    Institution: UNIVERSITY OF CALIFORNIA BERKELEY
    A Comprehensive Test Suite for SBML Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM077671-01
    Actv: R01
    IC: GM
    PI Name(Contact): HUCKA, MICHAEL
    Institution: CALIFORNIA INSTITUTE OF TECHNOLOGY
    Predicting protein flexibility and stability Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 3R01GM073082-01A1S1
    Actv: R01
    IC: GM
    PI Name(Contact): JACOBS, DONALD J
    Institution: UNIVERSITY OF NORTH CAROLINA CHARLOTTE
    Optimizing Coordinated Combination Drug Therapy Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01EB005803-01A1
    Actv: R01
    IC: EB
    PI Name(Contact): JELLIFFE, ROGER W
    Institution: UNIVERSITY OF SOUTHERN CALIFORNIA
    Computational Genomics of Signal Transduction Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 5R01GM072285-03
    Actv: R01
    IC: GM
    PI Name(Contact): JOULINE, IGOR B
    Institution: UNIVERSITY OF TENNESSEE KNOXVILLE
    Experimental Standards and Computational Platform for HTP Proteomics Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM076680-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): KOLKER, EUGENE
    Institution: BIATECH INSTITUTE
    Force Field Development for Protein Absorption Modeling Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01EB006163-01
    Actv: R01
    IC: EB
    PI Name(Contact): LATOUR, ROBERT A
    Institution: CLEMSON UNIVERSITY
    A Genetic Association Research Statistical Framework Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG003646-01A1
    Actv: R01
    IC: HG
    PI Name(Contact): LAZARUS, ROSS
    Institution: BRIGHAM AND WOMEN'S HOSPITAL
    Genome Pathway Modeling Diabetic Atherosclerosis Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HL081690-01A1
    Actv: R01
    IC: HL
    PI Name(Contact): LEE, JAE K
    Institution: UNIVERSITY OF VIRGINIA CHARLOTTESVILLE
    Computational Models for Mechanisms of Global Transcription Regulation Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG004069-01
    Actv: R01
    IC: HG
    PI Name(Contact): LIU, XIAOLE SHIRLEY
    Institution: DANA-FARBER CANCER INSTITUTE
    Bayesian Mixture Modeling of Functional Genomics Data Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG003749-01A1
    Actv: R01
    IC: HG
    PI Name(Contact): MEDVEDOVIC, MARIO
    Institution: UNIVERSITY OF CINCINNATI
    Genboree System for Translational Studies of Genome Variation Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG004009-01
    Actv: R01
    IC: HG
    PI Name(Contact): MILOSAVLJEVIC, ALEKSANDAR
    Institution: BAYLOR COLLEGE OF MEDICINE
    Probabilistic Modeling of Information from Images/Text Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM078622-01
    Actv: R01
    IC: GM
    PI Name(Contact): MURPHY, ROBERT F
    Institution: CARNEGIE-MELLON UNIVERSITY
    Method for In-Vivo Assessment of Neuronal Dysfunction Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R21NS049534-01A2
    Actv: R21
    IC: NS
    PI Name(Contact): NICOLELIS, MIGUEL A. L.
    Institution: DUKE UNIVERSITY
    Cortical Reconstruction and Analysis Software Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01NS054255-01
    Actv: R01
    IC: NS
    PI Name(Contact): PHAM, DZUNG L
    Institution: JOHNS HOPKINS UNIVERSITY
    Decoding Gene Expression Control Using Conditional Clustering by Dyanamics Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG003354-01A2
    Actv: R01
    IC: HG
    PI Name(Contact): RAMONI, MARCO F
    Institution: CHILDREN'S HOSPITAL BOSTON
    Methods for Analysis of High Throughput Assay Data Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HG003352-01A2
    Actv: R01
    IC: HG
    PI Name(Contact): ROCKE, DAVID M
    Institution: UNIVERSITY OF CALIFORNIA DAVIS
    High-Performance Pattern Analysis for CT Colonography Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01CA114492-01A2
    Actv: R01
    IC: CA
    PI Name(Contact): SANTAGO, PETER
    Institution: WAKE FOREST UNIVERSITY HEALTH SCIENCES
    Genome-wide analysis of regulated chromosomal domains: From mechanisms to cancer Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01CA119176-01
    Actv: R01
    IC: CA
    PI Name(Contact): SEGAL, ERAN
    Institution: WEIZMANN INSTITUTE OF SCIENCE
    Computational Modeling of Developmental Processes Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM075200-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): TABER, LARRY A
    Institution: WASHINGTON UNIVERSITY
    Segmentation of Ultrasound Images Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01HL077810-01A2
    Actv: R01
    IC: HL
    PI Name(Contact): TAGARE, HEMANT D
    Institution: YALE UNIVERSITY
    New Scoring, Assembly and Evaulation Techiniques for Protein Structure Prediction Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R21GM078601-01
    Actv: R21
    IC: GM
    PI Name(Contact): XU, DONG
    Institution: UNIVERSITY OF MISSOURI-COLUMBIA
    Data-driven Computational Modeling of the Growth and Spread of Viruses Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R21AI071197-01
    Actv: R21
    IC: AI
    PI Name(Contact): YIN, JOHN
    Institution: UNIVERSITY OF WISCONSIN MADISON
    Integrative Analysis of Cross-Platform Microarray Data Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM074163-01A1
    Actv: R01
    IC: GM
    PI Name(Contact): ZHOU, XIANGHONG JASMINE
    Institution: UNIVERSITY OF SOUTHERN CALIFORNIA
    High-Resolution CryoEM Reconstruction of Large Complexes Fiscal Year: 2006
    RFA/PA Number: PAR03-106
    Grant Number: 1R01GM071940-01A2
    Actv: R01
    IC: GM
    PI Name(Contact): ZHOU, Z HONG
    Institution: UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON
    Cross-species meta-analysis tool for high-throughput genomic research Fiscal Year: 2006
    RFA/PA Number: PAR03-119
    Grant Number: 1R43GM078602-01
    Actv: R43
    IC: GM
    PI Name(Contact): AKHTARI, SAEID
    Institution: NEXTBIO
    3D Virtual Slide System for Creation and Analysis of Focusable Digital Slides Fiscal Year: 2006
    RFA/PA Number: PAR03-119
    Grant Number: 1R43MH076188-01
    Actv: R43
    IC: MH
    PI Name(Contact): GLASER, JACOB R
    Institution: MICROBRIGHTFIELD, INC.
    Phase 1 - Collaborative Analysis Management System ('CAMS') Fiscal Year: 2006
    RFA/PA Number: PAR03-119
    Grant Number: 1R43RR022289-01
    Actv: R43
    IC: RR
    PI Name(Contact): HYUN, WILLIAM
    Institution: BIOTRUE, INC.
    'LabOS' Closed-loop, Protocol-driven, Data Acquisition & Experiment Control Fiscal Year: 2006
    RFA/PA Number: PAR03-119
    Grant Number: 1R41EB006219-01
    Actv: R41
    IC: EB
    PI Name(Contact): MILLER, JOEL M
    Institution: EIDACTICS VISUAL BIOSIMULATION
    Discriminating Drug Safety Profiles in Polytherapy Fiscal Year: 2006
    RFA/PA Number: PAR03-119
    Grant Number: 2R44RR019105-02
    Actv: R44
    IC: RR
    PI Name(Contact): PATEL, ARTI C
    Institution: CAPITAL TECHNOLOGY INFORMATION SERVICES
    Integrating, Validating & Applying Pharmacogenetic Data Fiscal Year: 2006
    RFA/PA Number: PAR03-119
    Grant Number: 1R43GM077682-01
    Actv: R43
    IC: GM
    PI Name(Contact): RABINOWITZ, MATTHEW
    Institution: GENE SECURITY NETWORK
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